Source: IOWA STATE UNIVERSITY submitted to NRP
PORTABLE, IN-FIELD BIOSENSOR FOR MULTIPLEX SENSING OF COMMON MIDWESTERN HERBICIDES
Sponsoring Institution
National Institute of Food and Agriculture
Project Status
COMPLETE
Funding Source
Reporting Frequency
Annual
Accession No.
1026406
Grant No.
2021-67011-35130
Cumulative Award Amt.
$180,000.00
Proposal No.
2020-10083
Multistate No.
(N/A)
Project Start Date
Jun 15, 2021
Project End Date
Aug 14, 2024
Grant Year
2021
Program Code
[A7101]- AFRI Predoctoral Fellowships
Recipient Organization
IOWA STATE UNIVERSITY
2229 Lincoln Way
AMES,IA 50011
Performing Department
Mechanical Engineering
Non Technical Summary
Annually, the United Statesapplies 1.2 billion pounds of pesticides, 57% of which are herbicides. Estimates by the USDA indicate that roughly 50 million Americans may use drinking water that is potentially contaminated with pesticides. Though pesticides are pertinent for food security and production, migration to non-target crops, organisms, and ecosystems have been confirmed. Though there is much more to be understood about the environmental and health risks of non-target pesticide exposure, studies have shown that exposure even under the EPA-designated tolerance levels may lead to a variety of health risks including low birthweight, abnormal brain development, and increased cancer.In order to better understand pesticide exposure, sensing devices must be developed to map pesticides regionally. Sensing devices will be made for each pesticide that is of concern in the Midwest using low-cost materials. Multiple sensors can be used simultaneously to detect a variety of pesticides. These sensors can be combined into an all-in-one device. After many validation methods, the device will be used in real-life applications including surface waters, agricultural fields, and rivers.Monitoring these systems allows for the development of accurate pesticide mapping. The developed sensor can be used in various locations and bypasses the need to take samples back to a high tech lab. This allows for farmers to operate an easy-to-use device for monitoring their fields. The device can be used by other personnel to monitor surface waters and rivers. Through this accumulation of knowledge, policymakers will see a clearer picture regarding the migration of pesticides to unintended fields, organisms, and ecosystems. Policies can then be enacted that promote agricultural sustainability, reduce pesticide pollution, and reduce the risk that pesticides pose to humans.
Animal Health Component
40%
Research Effort Categories
Basic
20%
Applied
40%
Developmental
40%
Classification

Knowledge Area (KA)Subject of Investigation (SOI)Field of Science (FOS)Percent
1120199310010%
1330330310010%
4025220202080%
Goals / Objectives
Goal I. Develop Nanoporous Gold Leaf Electrodes for Specific Pesticide DetectionObjective 1. Fabricate atrazine, glyphosate, dicamba, 2,4-dichlorophenoxyacetic acid sensors using various enzymes (e.g., glycine oxidase, glyoxalate reductase, horseradish peroxidase, tyrosinase, acetylcholinesterase, and antibodies) Objective 2.Incorporate machine learning algorithms to optimize fabrication processObjective 3. Determine the surface functionalization method (e.g., glutaraldehyde, EDC/NHS) that allows for the most sensitive detection of pesticidesObjective 4. Adjust enzyme concentration between 2-2000 unit/mL to capture nominal concentrations of the pesticides in surface water using amperometry and/or electrochemical impedance spectroscopyObjective 5. Test interferent pesticides and inorganic molecules against each pesticide-specific biosensor with a maximum of 10% interferenceObjective 6. Merge individual pesticide biosensors onto multiplex platform and perform accuracy tests compared to individual calibration with a minimum of 95% accuracyObjective 7. Test in complex fluids such as river water and soil slurries and compare the accuracy to the multiplex calibration with a minimum of 95% accuracyGoal II. Develop 3D Printed Microfluidic Cartridge Objective 1. Design microfluidic chamber for a peel-and-stick multiplex sensor using fluid dynamics software and 3D print using FormLabsObjective 2. Confirm design with real-time monitoring of fluid flow using a cameraObjective 3. Incorporate multiplex sensor and compare results to pesticide calibrations developed in Goal I. Ensure a 95% accuracyObjective 4. Confirm in complex fluids with a 95% accuracyGoal III. Validate In-Field Pesticide Data with ML AlgorithmsObjective 1. Use models developed from Goal I & II to formulate a machine learning algorithm from 50 data setsObjective 2. Collect water samples from South Fork Iowa River watershed and ensure pesticide detectionObjective 3. Obtain true pesticide concentrations by using the USDA-ARS and Iowa State University for mass spectroscopy and liquid/gas chromatographyObjective 4. Iterate ML algorithm to ensure in-field pesticide accuracy of 95% by comparing to laboratory confirmationGoal IV. Extension and Dissemination of ResearchObjective 1. Host workshops at Iowa State University that are open to students, staff, and the public; workshops will be held at the beginning of the project to gather stakeholder feedback and at the end of the project to demonstrate the deviceObjective 2. Work with the Iowa State University Extension office to have direct correspondence with immediate stakeholders including farmers and policy makersObjective 3. Disseminate research findings through attending and presenting at conferences as well as through publicationsGoal V. Mentorship and Career DevelopmentObjective 1. Actively mentor 2-4 undergraduate researchers throughout the scope of the projectObjective 2. Gain experience and establish communication with farmers and other stakeholders to ensure sustainable and precision agriculture aligned with the AFRI Farm Bill priority of Agriculture Systems and Technology
Project Methods
MethodsThe project will be conducted by first fabricating sensors that are specific to certain pesticides. These pesticide specific sensors will be made by experimenting with various enzymes, antibodies, cross-linking methods, and electrochemical methods. Microfluidics will be made to incorporate the multiplex sensor to further the progress of a simple, in-field pesticide sensor. Various data sets will be collected to formulate a machine learning algorithm. Results will be analyzed through the use of amperometry and/or electrochemical impedance spectroscopy. Either method utilizes a current or resistance reading that correlates to the signal induced or inhibited by varying pesticide concentration and types. Individual sensors are evaluated based upon response time, sensitivity, limit of detection, and performance in complex fluids.EffortCoordination with the Iowa State Extension and Outreach Office will ensure the transfer of research and knowledge to farmers and policymakers. Students, staff, and the public will be given the opportunity to attend workshops and presentations. These workshops will be held at the beginning of the project to gather stakeholder feedback and at the end of the project to demonstrate the device. Publications, patents, and presentations will allow for the dissemination of knowledge to the scientific community as well.EvaluationThis project will be evaluated upon the success of developing a multiplexed sensing device that can be incorporated into a microfluidic and used to monitor pesticides in river and agricultural locations. The success of the sensing device will mainly relate to the sensitivity, linear range, and specificity of the overall multiplex device. The device must evaluate complex fluids and real samples which will be compared to mass spectroscopy and liquid/gas chromatography readings from the USDA-ARS and Iowa State University.

Progress 06/15/21 to 08/15/24

Outputs
Target Audience:The target audience of this effort included the agrochemical scientific community as well as other valuable stakeholders. These include end-users and policy makers with the goal of agrochemical monitoring and remediation. This effort has been communicated with Ag and Biosystems Engineering (ABE) admin at Iowa State who are affiliated with extension and outreach. Furthermore, such efforts and findings have been disseminated through published manuscripts and conferences including ACS and Wiley Journals as well as the Gordon Research Conference of Nanoscale Science and Engineering of Ag and Food Systems and the International Biological Engineering Conference. Changes/Problems:Cascade Enzyme Functionalization: Though we developed various sensors that could specifically detect a target agrochemical based upon the electrochemical potential or enzyme, designing new enzyme systems for dicamba and atrazine proved to be difficult. The solution to detecting both molecules involved a multi-enzyme cascade approach where the interaction of the pesticide and one enzyme produced a molecule that would interact with another enzyme, thus leading to a readable electronic signal. However, developing the optical assays to confirm the concept were fundamental compared to functionalizing an electrode with multiple enzymes. More research could be conducted to better understand how to develop a multi-enzyme assay or functionalizing an electrode with multiple enzymes that must act sequentially. What opportunities for training and professional development has the project provided?Funds have provided training in a variety of technical trainings including 3D printing, scanning electron microscopy, dynamic light scattering, liquid chromatgraphy-mass spectroscopy, and electrochemical instruments. I have received professional development opportunities throughfunded conferences (Gordon Reserach Conferecne and International Biological Engineering). How have the results been disseminated to communities of interest?Results have been disseminated through scientific journals and conferences. Additionally, a relationship has been created through the Iowa State University Ag and Biosystems Engineering department and extension and outreach with respect to agrochemical monitoring with the compact devices devloped in this work. What do you plan to do during the next reporting period to accomplish the goals? Nothing Reported

Impacts
What was accomplished under these goals? The entirety of Goal I, II, IV, and V were completed witht the exception of hosted workshops in Goal IV Obj 1. No progress was made toward goal III.

Publications

  • Type: Peer Reviewed Journal Articles Status: Published Year Published: 2024 Citation: R. Zribi, Z. T. Johnson, G. Ellis, C. Banwart, J. Opare-Addo, S. L. Hooe, J. Breger, A. Foti, P. G.Gucciardi, E. A. Smith, C. L. Gomes, I. L. Medintz, G. Neri, J. C. Claussen. Molybdenum Disulfide/Diselenide-Laser-Induced GrapheneGlycine Oxidase Composite for Electrochemical Sensing of Glyphosate (2024). ACS Applied Materials & Interfaces.


Progress 06/15/23 to 06/14/24

Outputs
Target Audience:The target audience has remained the same for this reporting period. Research has been disseminated to biosensing colleagues, environmental monitoring personnel, and agricultural stakeholders in the form of manuscripts, editorials, and conferences. Additionally, the work associated with this fellowship has been discussed with professors in Iowa State University's Department of Agricultural and Biosystems Engineering. Through these discussions, we have brainstormed approaches to communicating our research to farmers, legislators, and outdoor recreational companies who would be interested in our environmental monitoring devices. We are coordinating a virtual field day where we will demonstrate our devices in field applications, with the recorded demonstration made available to interested stakeholders. Changes/Problems:In developing our planar, solid state devices, we have found difficulties in creating a stable reference electrode. Commerical reference electrodes require metallic silver to be coated with silver chloride in a aqueous potassium chloride vial. Due to the miniuarization of our devices, we must make the reference a solid state system without the use of potassium chloride. However, in eliminating this electrolyte, we must apply a salt-loaded PVC membrane. This reference is stable except in solutions with large fluctuations of chlorides. These fluctuations present difficulties in acquiring stable readings for selective ion sensing. To solve this issue, we plan to either create a small PDMS well that houses the liquid electrolyte or to first coat our reference with silver followed by a silver/silver chloride ink that is further bleached to ensure the proper chlorination of the electrode. What opportunities for training and professional development has the project provided?I have received further opportunities to present my research at conferences, including the Gordon Research Conference for Nanoscale Sciencce and Engineering for Agriculture and Food Systems (June 2024). How have the results been disseminated to communities of interest?Work has been dissimenated or planned to be dissimenated in ACS Sensors, Global Challenges, Nano Futures, ACS Applied Materials and Interfaces, and ACS Nano. What do you plan to do during the next reporting period to accomplish the goals? Nothing Reported

Impacts
What was accomplished under these goals? Similar to or in addition to the previous project report, Goal I, II, and V havebeen completed in their entirety.Goal IV has been partially completed. Objective 2 will tentatively be accomplished by the end of June 2024 as we are coordinating a virtual workshop to demonstrate the use of our devices in the field, at which point the recording will be made available to interested stakeholders.

Publications

  • Type: Conference Papers and Presentations Status: Accepted Year Published: 2024 Citation: Agricultural Monitoring through Nanoengineering of Graphitic Surfaces. Nanoscale Science and Engineering for Agriculture and Food Systems - Gordon Research Conference.
  • Type: Journal Articles Status: Under Review Year Published: 2024 Citation: Molybdenum Nanosheet-Functionalized Laser-Induced Graphene with Glycine Oxidase for Electrochemical Sensing of Glyphosate. ACS Applied Materials & Interfaces.
  • Type: Journal Articles Status: Other Year Published: 2024 Citation: Enhanced Laser-Induced Graphene Microfluidic Integrated Sensors (LIGMIS) for On-site Biomedical and Environmental Monitoring. ACS Nano. (pre-submission)
  • Type: Journal Articles Status: Accepted Year Published: 2024 Citation: Roadmap on Printable Electronic Materials for Next-Generation Sensors. Nano Futures.
  • Type: Theses/Dissertations Status: Accepted Year Published: 2024 Citation: Development of Graphene-Based Electrochemical Sensors for Agrochemical and Biomedical Monitoring. Iowa State University.


Progress 06/15/22 to 06/14/23

Outputs
Target Audience:The target audience has remained the same for this reporting period. Research has been disseminated to biosensing colleagues, environmental monitoring personnel, and agricultural stakeholders in the form of manuscripts, editorials, and conferences. Changes/Problems:Complex fluid validation is not too straightforward and typically requires some type of analyte extraction, which is a process we hoped to avoid to make our electrochemical approach simple. Additionally, if the sample is not diluted enough, it remains to viscous and turbid and potentially harms the surface of the sensors. Our plan is to explore other nanomaterials that lower our limits of detection so that we may dilute the samples beyond this turbidity point and ideally avoid further sample extraction. Another challenge has been discriminating between glyphosate and AMPA, the major glyphosate metabolite. Though both are indiciative of the initial presence of glyphosate, we planned to detect both selectively against one another. However, as the structures are similar, our biorecognition agent uses similar chemical identifiers in both chemicals to react with, thus making it difficult to distinguish between them. We have explored the idea of deamination to convert a fluid sample between glyphosate and AMPA, but this work is in its beginning stages. What opportunities for training and professional development has the project provided?This project has offered me opportunities in meeting others in the biosensing and nanomaterial community from various universities and countries. Additionally, our newest work will be disseminated through another publication which we plan to submit to ACS Nano. This work will be disseminated at conferences as well. How have the results been disseminated to communities of interest?Work has been disseminated through journal publications (ACS Sensors, Global Challenges) and conferences including the Gordon Research Conference and the Institute for Biological Engineering. What do you plan to do during the next reporting period to accomplish the goals?I plan to finalize the multiplex sensor and fluid modeling. To finalize the project, I plan to incorporate the ML algorithm and to extend my research findings and project ideas in a workshop with agricultural workers and other associated personnel. This will be done with the help of the Department of Agriculturaland Biosystems Engineeringat Iowa State University.

Impacts
What was accomplished under these goals? In addition to the previous goals completed during the last progess report, we have begun work on the multiplex aspect and real sample validation. Briefly, a multiplex agrochemical sensor is being developed to take one sample droplet and divide into 2-3 sensing chambers. Fluidic modeling and the governing equations for fluid transport (Lucas Washburn and Darcy's Law) are being used to better understand the fluid flow in the microfluidic device. Thought not entirely complete, this involved Goal I Objectives 6 and 7 and Goal II Objectives 1-4.

Publications

  • Type: Conference Papers and Presentations Status: Accepted Year Published: 2022 Citation: Enzymatic Biosensors for Electrochemical Sensing of Herbicides and Insecticides. Nanoscale Science and Engineering for Agriculture and Food Systems - Gordon Research Conference.
  • Type: Conference Papers and Presentations Status: Accepted Year Published: 2023 Citation: Glycine Oxidase Functionalized Laser-Induced Graphene as a Selective Glyphosate Biosensing Platform. Institute of Biological Engineering Conference.
  • Type: Journal Articles Status: Other Year Published: 2023 Citation: Enzymatic Molybdenum Nanosheet-Functionalized Laser-Induced Graphene Sensor for Electrochemical Sensing of Glyphosate (pre-submission)


Progress 06/15/21 to 06/14/22

Outputs
Target Audience:This reporting period ending in June of 2022 reaches biosensing colleagues, environmental monitoring personnel, and agricultural stakeholders. Changes/Problems: Nothing Reported What opportunities for training and professional development has the project provided?This project has allowed PD Johnson to prepare research findings that will be presented at the Gordon Research Conference which is a nanoscale-based symposium for agriculture and food systems research. PD Johnson will be given the opportunity to engage and network with others in the scienfic and food systems community. How have the results been disseminated to communities of interest?To this point, results have been disseminated through publications in peer-reviewed journals (ACS Sensors and Global Challenges). The most immediate dissemination will occur in the stakeholder and agricultural/biosystems workshop in coordination with the ISU ABE extension and outreach office. What do you plan to do during the next reporting period to accomplish the goals?PD Johnson will continue work on novel and commerically available enzymes and antibodies that can be used to detect the remaining herbicides listed in the project. To this date, the detection of glyphosate has been completed. Preliminary data indicates the current researched enzymes can detect atrazine and 2,4-D. PD Johnson will coordinate with the Naval Research Lab and explore current literature to determine the best course of action for detecting dicamba. As pesticide deteciton progresses, PD Johnson will work with mentors and collaborators toimplementmachine learning algorithms and validatethe sensors in real-time at field locations.

Impacts
What was accomplished under these goals? Under Goal I, objectives 1, 3, 5, and 7 have been fully or partially completed. Glyphosate and its cheimcal oxidation through glycine oxidase have been submitted to Global Challenges. Additionally, the enzyme glyoxylate reductase can also be used but this sensor needs further tuning. Preliminary data indicates the enzyme atrazine hydrolase can be used to hydrolize atrazine, thus cleaving a chloride ion that can be potentiometrically read. The enzyme tyrosinase is inhibted by the 2,4-D. Glutaraldehyde is a fairly succesfful protein cross linker and best works near concentrations of 0.2-0.5%. EDC/NHS chemistry is also possible and is better employed for self-assembled monolayer functionlization methods which are required for the nanoporous gold leaf material. The current, developed biosensors are negligibly influenced by other pesticide interferents and showa strong affinity toward the appropriate herbicides. Pesticides have been accurately detected in complex fluids including river water from the South Skunk River as well as corn and soybean residues. Under Goal IV, objectives 1, 2, and 3 have been fully or partially completed. PD Johnson is in coordination with the ISU Agricultural and Biosystems Engineering extrension and outreach to conduct a workshop with local stakeholders, students, and other interested parties. Research has been disseminated through publications and will be disseminated in June of 2022 at the Gordon Research Conference. Under Goal V, objective 1 has been fully or partially completed. PD Johnson mentors 2 undergraduate students and 1 graduate student. All students under PD Johnson's mentorship have contributed to the current success of this USDA NIFA project.

Publications

  • Type: Journal Articles Status: Submitted Year Published: 2022 Citation: Johnson, Z. T.; Jared, N.; Peterson, J. K.; Li, J.; Smith, E. A.; Walper, S. A.; Hooe, S. L.; Breger, J. C.; Medintz, I. L.; Gomes, C.; Claussen, J. C.; Enzymatic Laser-Induced Graphene Biosensor for Electrochemical Sensing of the Herbicide Glyphosate. Global Challenges (2022). Submitted.
  • Type: Journal Articles Status: Published Year Published: 2021 Citation: Johnson, Z. T.; William, K.; Chen, B.; Sheets, R.; Jared, N.; Li, J.; Smith, E. A.; Claussen, J. C. Electrochemical Sensing of Neonicotinoids Using Laser-Induced Graphene. ACS Sensors (2021).